CDS
| Accession Number | TCMCG049C27683 |
| gbkey | CDS |
| Protein Id | XP_034914417.1 |
| Location | complement(join(29838..31057,32694..34530,34532..35842,36998..37786)) |
| Gene | LOC118048723 |
| GeneID | 118048723 |
| Organism | Populus alba |
Protein
| Length | 1718aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA638679 |
| db_source | XM_035058526.1 |
| Definition | LOW QUALITY PROTEIN: ATP-dependent RNA helicase DEAH11, chloroplastic-like [Populus alba] |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | Helicase associated domain (HA2) Add an annotation |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03041 [VIEW IN KEGG] |
| KEGG_ko |
ko:K12818
[VIEW IN KEGG] |
| EC |
3.6.4.13
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway |
ko03040
[VIEW IN KEGG] map03040 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGATCAACAGCAATAACCACCACCACTCCCAACACCGTCAGTCGCAGCATTTCAACCGCCACCGGAACTTCCGAAACCACCAAAACCAAAGCCTTTTTGTAGTCAGGCTTTTGTCCAACCACCGTAATAATAACCGCACGCAATCCCCACTCGAAACCCTAATTTCCCAATGTAAACCTGACAAATCCGATAGAAACCCCACGTCCGCCGTCGCTGCTCGTTTGTTTTTCCACGACCAGAGCGATGCTATCGCCGCCGCCGTCTTCCTCTGGGAACGGAGGCTGGCTGGGGATCATGTGTATACTCCGGTGACGGATTTTGATGTAAATGAAGGGGACTTGAATGAGAGGATTAGAGGTTTGTTTAAATTGTATGCAGAGAAGGTGTTAGAAGGGGAGGTAGTGAAGAAATTGGAGAGAAAGATTGAAAATTTGGCCGTGGAAATTGGTAAATTTACGAGCTTTTTCAAGCGGCCGAAAGGGGTTAGGGTTTATAGTGAGAATAAGTTGAAGAAGGAGGCGTTGAGGGTGGAAATGGAGGTGGTTGTGAAGAGGGCGGAGGAGTTTAGGAAGGGAATGCGGTGTTTGATGGATTGCATTGAAGGGAAGGAGATTGGTGATTTGGGGGTTTTTAGGGTTTATGATGAGGGTAATGGGAGAAAGATGGGAATTTTTTATTATTGGAGCAGGATTCATTTTCTGATACTCAGAGAGTGTAGAAGGGTAGAAAATGGGTTGCCTATTTATGGGTTTAGGAGTGAGTTTTTAAAGATGCTGCATTCACAGCAGGTGATGGTCTTGATTGGAGAGACAGGTTCAGGGAAGAGTACGCAGTTGGCACAATTTATTGCTGATTCAGGAGTTGCGTCAAGTGGTTCAATTTTGTGCACTCAACCCCGCAAAATTGCTGCTATATCCCTGGGAAAAAGGGTTGGTGAAGAATGCAATGGATGTTATGAAAATAATTCAATTATCTGCTACCCATCTTATTCATCTTCCCAGCAGTTTGGTTCGAAGGTAATATATATGACTGATCACTGTCTGCTGCAAAACCTCATGAAAGATAAAAAATTGTTTGGAGTTTCATGCATTATTGTAGATGAGGCTCATGAAAGAAGCTTGAATACTGATCTTCTTTTGGGCTTGCTAAAAGAATTACTTCAGGAAAGGCCTGACTTACAGCTAATTATAATGTCTGCAACAGTTGATGCAAGCAAATTATCCAGTTACTTCTTTGGTTGTGGAACATTTCATGTGTTGGGGCGAAGCTTTCCTGTTGAAATCAAATATGCTCCTGCTGCATCTAGAGAGTCCCTTGATCCCTTGCCGAGCTCCAATAATGCAGCTCCATATGTTTGTGATGTTGTTAAGATGGCAATGGAAATTCATGCAGCAGAGGAGGATGGGGCAATACTTGCTTTTTTGACTTCACAGGCAGAAGTAGAATGGGCATGTGAAAAGTTTCAGTCTCCCTCTGCAATTGCGCTCCCATTACACGGGAAGCTTTCCCATGAAGAGCAATGTCGTGTTTTTCAGAATTACCCAGGAAAGAGAAAAGTTGTTTTTGCTACAAATTTAGCGGAAACATCCTTAACAATTCCAGGGGTCAAGTACGTGGTTGATCCTGGTTTAGTTAAAGATAGCAGGTTTGAATCTTCATCTGGTATGAATGTGCTCAGAGTTTCCAAGATCAGCCAAAGTTCTGCAAATCAACGAGCTGGCCGTGCTGGTAGAACAGATCCTGGCAAGTGTTACCGGCTGTACTCGGTTTCTGATTATCAGTCAATGGATTTGCATCAGGAACCTGAAATTTGTAAAGTTCATCTTGGCATTGCAGTTTTGAGGATTCTTGCCTCTGGTATTAAGAATGTGCTAGAGTTTGATTTTATTGATGCTCCAAGTGTGGATGCAATCAACAAGGCAATCAGGAACCTTGTTCAGTTAGGTGCTGTTGCCTGCAAACATGATGCTTTTGCATTAACTGCTGATGGGCACTACTTAGTTAAATTGGGTATGGAGCCTCGTCTTGGGAAAATTATTCTTGAAAGTCTCCGTTATGGTTTGCGCAAGGAGGGAGTTGTCCTTGCTGCAGCTATGGCAAATGCCAGTAACATTTTTTGCAGAGTGGGTACTTATGATGAGAAACTGAAGTCTGATTGCCTTAAGGTCCGGTTCTGCCATCATGATGGAGATCTCTTCACTTTGCTCTCCGTCTACAGGGAATGGGAGAGTATACGGCAAGAGAATAGAAATAAATGGTGTTGGGAAAATAGAATCAATGCAAAAACTATGCGAAGATGCAGAGATACAGTATTGGAGTTGGAAAACTGTTTGAAAAATGAACTCAATTTCATCATTCCAACTTACTGGCTTTGGGATCCTCTTGTTGCCTCCGTGCATGATGAAAACATGAAGAAGATTATACTTTCTTCACTAGCAGATAATGTAGCCATGTATTCTGGATATGATCGCCTTGGTTATGAGGTTGTTTTAAGTGGTGAATACTTCCAACTTCACCCTTCATGTTCATTACAAGTGTATAACCAGAAGCCACATTGGGTTGTCTTTGCTGAACTCTTGTCCATATCAAGTCAATATTTGGTTTGTGTTACAGCAATTGACTTTGACAGTTTATCTACCTTCATACATCCTTTATTTGATGTCTCAAAGATGGAGTCTAGAAAACTGCAGTTGAGGGTGATAAAAGGATTTGGAGGTGTAGCTCTGAAACGGTTTTGTGGAAAGTCAAATAGTAGCTTGACAGCACTTGTTTCTCGCATGCGTGCTATTTACATGGATGAACGCATTGGAATTGAAATCAATGTGGGTGACAACGAGATTCAATTGTTTGCATCGTCCAAAGATATTGAAAAGATTTATGAATATGTCAATAATGCCTTAATTTATGAAACAAAGTGGTTAAGGAATGAATGCTTGGAGAAGTGCTTATATCATGAGGTACGGGCTGGTGCTTCCCCCCCTGTTGCACTTGTTGGAGCTGGTGCTGAAATTAAGCATCTGGAGTTGGGAAATAGATGTTTAACAGTGGATGTGCACCTTTCCAATGTGAATGTGGTAGATGACAAGGAAGTTTTGACTTTCTTAGAGAAATCTGTATCTGGAATTTGTGGTTATAACAAATTCACGGGCACTGGACAGCATGGTGATGATGCAGAAAGGTGGGGCAGGGTGTCATTCCTTACTCCTGAAGCAGCTAGAAAAGCTCTATATTTTAATGGATCCGAGTTATGTGGATGTGTACTTAAGTTGTCCCTGTCTCGGTCATCTGTTGGAGGTATTCGAAAGTCATCATTTGCTGCCGTAAAAGCAAAAATCAGTTGGCCACGCCGGTATAGCAAAGGGTATGCAATTGTCAGATGTGAAAGGAATGATGCCCAGTTCATTGTTGATGATTGCTTTAATGTTCTGATTGGAGGCAGGTTTGTTCAGTGTCAGACCAGCACAAGAGACATGAACTCTGTAGTTATCAGAGGACTGGATAAAGAAACTTCTGAAGCAGAAATTTTAGAAGTTCTGCACAAGACAACAAATAGGAGAATTTTGGATGTATTCCTAATCAGAGGAGATGAAGTAAATAATCATTCTGTTGATGCTTTTGAGCAAGCAATTCTCAAGGAAATTGCTCCTTTCATGCCTAGCCAGGGCCCTTTGAGCAATTACTGCCATGTTCAGGTCTTCGCTCCTGAGCCAAAGGATAGTTTCATGAAGGCTTGGATCACTTTTGATGGAAAATTACATTTGGAGGCAGCTAAAGCTCTGCAACATATGCAAGGAAAAGCACTTGCTGGTTGTTTTTCATGGCAGAAGATGCAATGCCAGCAGGTGTTCCATAGCTCTGCATCATGTTCTGCTTCTGTTTATGCATTCATTGAGAGGCAGCTGAATATTTTACTGAAAAGCTTCAAGTTTCGACCTGGTGTGTGTTGCAATTTAGAAAGGAATGAGAATGGCTCTTATAGAGTGAAGATATCTGCTAATGCAACAAAGACAGTAGCTGAGTTGAGAAGGCCACTGGAGCAACTGATGAATGGAAAGAAGGTAAATCATTGTAGCCTCACCCCAATGGTTCTGCAGCTTCTTTTTTCCAAAGATGGCATCATGCTTATGAAGTCACTGCAGCAAGAGATGGGAACATATATTCTCTTTGATAGGCAGAACCTCACTGTTAGGATCTTTGGCCCCGAGAAGAAAGTTGCTCTCACTGAACAGAAGTTGATAGCATCTCTTCTAGCCCTCCATGATAAGGAACAAACAGATATCCGCCTTCGAGGTGGAGCAATGCCTTATGATCTTATGAAAAAAGTGGTGGAGAAGTTTGGTCCTGACTTGCATGTGCTCAAAGAGACGATCCCTGAGGCTGAATTTATGCTTAATACAAGGCGACATGTTATTTCTTTTTCTGGAAAAAAGGATCTGAGACTGCAAGTGGAGCAGATGATTCGTGACTTTGCGCGGTCTGTTGGTGTTAATGGATCCATCAAACGATATGAAGATGACAATATTGCCTGCCCTATTTGCCTCTGTGAGGTTGAGGACTGTTACCAGCTTGAGGCTTGTGGGCATAAATTCTGCCAGTCATGCTTGGTTGAACAGTTAGAGTCAGCAATGAGAGGACGTGATGGCTTCCCTGTAGGTTGTGCTCATGAAGGTTGTGGCATGCACATTTGGCTTGCAGATCTGAAGTCTCTTTTACCATGTGAAAAGTTAGAGGATCTCTTCAGGGCCTCCTTGTCAGCCTTTGTGGCATCTAGTGGTGGAACCTACAGATTTTGCCCATCTCCTGATTGCCCTTCAGTATATCGCGTAGCAAGCGGGATGGTTGGTGATCTATTTGTTTGTGGAGCATGCTATGCTGAGACATGTACAAGGTGCCATGTGGAGTATCATCCATTCGTATCATGTGAAAAATACAAGGAGCTCAAGGAGGATCCCGACATGTCCTTGAAGGAATGGTGCAAGGGAAAAGAGCATGTTAAAAACTGCCCAGTATGTGGATACACAATTGAGAAGGTAGATGGCTGCAACCACATTGAGTGCAGATGTGGGAAACACATCTGCTGGGTCTGCTTGGAGTTCTTTATGAGCGGTGATGACTGCTATGTGCACTTGAGGTCTGAACATCCTGCTACATTATAA |
| Protein: MINSNNHHHSQHRQSQHFNRHRNFRNHQNQSLFVVRLLSNHRNNNRTQSPLETLISQCKPDKSDRNPTSAVAARLFFHDQSDAIAAAVFLWERRLAGDHVYTPVTDFDVNEGDLNERIRGLFKLYAEKVLEGEVVKKLERKIENLAVEIGKFTSFFKRPKGVRVYSENKLKKEALRVEMEVVVKRAEEFRKGMRCLMDCIEGKEIGDLGVFRVYDEGNGRKMGIFYYWSRIHFLILRECRRVENGLPIYGFRSEFLKMLHSQQVMVLIGETGSGKSTQLAQFIADSGVASSGSILCTQPRKIAAISLGKRVGEECNGCYENNSIICYPSYSSSQQFGSKVIYMTDHCLLQNLMKDKKLFGVSCIIVDEAHERSLNTDLLLGLLKELLQERPDLQLIIMSATVDASKLSSYFFGCGTFHVLGRSFPVEIKYAPAASRESLDPLPSSNNAAPYVCDVVKMAMEIHAAEEDGAILAFLTSQAEVEWACEKFQSPSAIALPLHGKLSHEEQCRVFQNYPGKRKVVFATNLAETSLTIPGVKYVVDPGLVKDSRFESSSGMNVLRVSKISQSSANQRAGRAGRTDPGKCYRLYSVSDYQSMDLHQEPEICKVHLGIAVLRILASGIKNVLEFDFIDAPSVDAINKAIRNLVQLGAVACKHDAFALTADGHYLVKLGMEPRLGKIILESLRYGLRKEGVVLAAAMANASNIFCRVGTYDEKLKSDCLKVRFCHHDGDLFTLLSVYREWESIRQENRNKWCWENRINAKTMRRCRDTVLELENCLKNELNFIIPTYWLWDPLVASVHDENMKKIILSSLADNVAMYSGYDRLGYEVVLSGEYFQLHPSCSLQVYNQKPHWVVFAELLSISSQYLVCVTAIDFDSLSTFIHPLFDVSKMESRKLQLRVIKGFGGVALKRFCGKSNSSLTALVSRMRAIYMDERIGIEINVGDNEIQLFASSKDIEKIYEYVNNALIYETKWLRNECLEKCLYHEVRAGASPPVALVGAGAEIKHLELGNRCLTVDVHLSNVNVVDDKEVLTFLEKSVSGICGYNKFTGTGQHGDDAERWGRVSFLTPEAARKALYFNGSELCGCVLKLSLSRSSVGGIRKSSFAAVKAKISWPRRYSKGYAIVRCERNDAQFIVDDCFNVLIGGRFVQCQTSTRDMNSVVIRGLDKETSEAEILEVLHKTTNRRILDVFLIRGDEVNNHSVDAFEQAILKEIAPFMPSQGPLSNYCHVQVFAPEPKDSFMKAWITFDGKLHLEAAKALQHMQGKALAGCFSWQKMQCQQVFHSSASCSASVYAFIERQLNILLKSFKFRPGVCCNLERNENGSYRVKISANATKTVAELRRPLEQLMNGKKVNHCSLTPMVLQLLFSKDGIMLMKSLQQEMGTYILFDRQNLTVRIFGPEKKVALTEQKLIASLLALHDKEQTDIRLRGGAMPYDLMKKVVEKFGPDLHVLKETIPEAEFMLNTRRHVISFSGKKDLRLQVEQMIRDFARSVGVNGSIKRYEDDNIACPICLCEVEDCYQLEACGHKFCQSCLVEQLESAMRGRDGFPVGCAHEGCGMHIWLADLKSLLPCEKLEDLFRASLSAFVASSGGTYRFCPSPDCPSVYRVASGMVGDLFVCGACYAETCTRCHVEYHPFVSCEKYKELKEDPDMSLKEWCKGKEHVKNCPVCGYTIEKVDGCNHIECRCGKHICWVCLEFFMSGDDCYVHLRSEHPATL |